已经提出了几十年来捕获胶质瘤的生长,最常见的原发性脑肿瘤的反应扩散模型。然而,关于估计这些模型的初始条件和参数值的严重局限性将其临床用作作为个性化工具。在这项工作中,我们调查了深度卷积神经网络(DCNN)来解决现场遇到的缺陷的能力。基于从磁共振(MR)数据的磁共振(MR)数据产生的1,200种合成肿瘤,我们证明了DCNN在单个时间点仅从两个成像轮廓重建整个肿瘤细胞密度分布的能力。通过在先前时间点提取额外的成像轮廓,我们还证明了DCNN准确估计模型的各个扩散性和增殖参数的能力。从这些知识来看,最终可以使用该模型精确地捕获稍后时间点处的肿瘤细胞密度分布的时空演变。我们终于展示了我们对真正的胶质母细胞瘤患者的先生数据的适用性。这种方法可以打开反应扩散生长模型的临床应用的视角,用于肿瘤预后和治疗计划。
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Pre-trained language models (PLM) have advanced the state-of-the-art across NLP applications, but lack domain-specific knowledge that does not naturally occur in pre-training data. Previous studies augmented PLMs with symbolic knowledge for different downstream NLP tasks. However, knowledge bases (KBs) utilized in these studies are usually large-scale and static, in contrast to small, domain-specific, and modifiable knowledge bases that are prominent in real-world task-oriented dialogue (TOD) systems. In this paper, we showcase the advantages of injecting domain-specific knowledge prior to fine-tuning on TOD tasks. To this end, we utilize light-weight adapters that can be easily integrated with PLMs and serve as a repository for facts learned from different KBs. To measure the efficacy of proposed knowledge injection methods, we introduce Knowledge Probing using Response Selection (KPRS) -- a probe designed specifically for TOD models. Experiments on KPRS and the response generation task show improvements of knowledge injection with adapters over strong baselines.
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The current trend of applying transfer learning from CNNs trained on large datasets can be an overkill when the target application is a custom and delimited problem with enough data to train a network from scratch. On the other hand, the training of custom and lighter CNNs requires expertise, in the from-scratch case, and or high-end resources, as in the case of hardware-aware neural architecture search (HW NAS), limiting access to the technology by non-habitual NN developers. For this reason, we present Colab NAS, an affordable HW NAS technique for producing lightweight task-specific CNNs. Its novel derivative-free search strategy, inspired by Occam's razor, allows it to obtain state-of-the-art results on the Visual Wake Word dataset in just 4.5 GPU hours using free online GPU services such as Google Colaboratory and Kaggle Kernel.
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In this paper we propose a general approach to define a many-valued preferential interpretation of gradual argumentation semantics. The approach allows for conditional reasoning over arguments and boolean combination of arguments, with respect to a class of gradual semantics, through the verification of graded (strict or defeasible) implications over a preferential interpretation. As a proof of concept, in the finitely-valued case, an Answer set Programming approach is proposed for conditional reasoning in a many-valued argumentation semantics of weighted argumentation graphs. The paper also develops and discusses a probabilistic semantics for gradual argumentation, which builds on the many-valued conditional semantics.
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Weather forecasting centers currently rely on statistical postprocessing methods to minimize forecast error. This improves skill but can lead to predictions that violate physical principles or disregard dependencies between variables, which can be problematic for downstream applications and for the trustworthiness of postprocessing models, especially when they are based on new machine learning approaches. Building on recent advances in physics-informed machine learning, we propose to achieve physical consistency in deep learning-based postprocessing models by integrating meteorological expertise in the form of analytic equations. Applied to the post-processing of surface weather in Switzerland, we find that constraining a neural network to enforce thermodynamic state equations yields physically-consistent predictions of temperature and humidity without compromising performance. Our approach is especially advantageous when data is scarce, and our findings suggest that incorporating domain expertise into postprocessing models allows to optimize weather forecast information while satisfying application-specific requirements.
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We study the learning dynamics of self-predictive learning for reinforcement learning, a family of algorithms that learn representations by minimizing the prediction error of their own future latent representations. Despite its recent empirical success, such algorithms have an apparent defect: trivial representations (such as constants) minimize the prediction error, yet it is obviously undesirable to converge to such solutions. Our central insight is that careful designs of the optimization dynamics are critical to learning meaningful representations. We identify that a faster paced optimization of the predictor and semi-gradient updates on the representation, are crucial to preventing the representation collapse. Then in an idealized setup, we show self-predictive learning dynamics carries out spectral decomposition on the state transition matrix, effectively capturing information of the transition dynamics. Building on the theoretical insights, we propose bidirectional self-predictive learning, a novel self-predictive algorithm that learns two representations simultaneously. We examine the robustness of our theoretical insights with a number of small-scale experiments and showcase the promise of the novel representation learning algorithm with large-scale experiments.
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Pretrained transformer models have achieved state-of-the-art results in many tasks and benchmarks recently. Many state-of-the-art Language Models (LMs), however, do not scale well above the threshold of 512 input tokens. In specialized domains though (such as legal, scientific or biomedical), models often need to process very long text (sometimes well above 10000 tokens). Even though many efficient transformers have been proposed (such as Longformer, BigBird or FNet), so far, only very few such efficient models are available for specialized domains. Additionally, since the pretraining process is extremely costly in general - but even more so as the sequence length increases - it is often only in reach of large research labs. One way of making pretraining cheaper is the Replaced Token Detection (RTD) task, by providing more signal during training, since the loss can be computed over all tokens. In this work, we train Longformer models with the efficient RTD task on legal data to showcase that pretraining efficient LMs is possible using much less compute. We evaluate the trained models on challenging summarization tasks requiring the model to summarize long texts to show to what extent the models can achieve good performance on downstream tasks. We find that both the small and base models outperform their baselines on the in-domain BillSum and out-of-domain PubMed tasks in their respective parameter range. We publish our code and models for research purposes.
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Synthetic data generation has recently gained widespread attention as a more reliable alternative to traditional data anonymization. The involved methods are originally developed for image synthesis. Hence, their application to the typically tabular and relational datasets from healthcare, finance and other industries is non-trivial. While substantial research has been devoted to the generation of realistic tabular datasets, the study of synthetic relational databases is still in its infancy. In this paper, we combine the variational autoencoder framework with graph neural networks to generate realistic synthetic relational databases. We then apply the obtained method to two publicly available databases in computational experiments. The results indicate that real databases' structures are accurately preserved in the resulting synthetic datasets, even for large datasets with advanced data types.
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In this paper, we propose the first-ever real benchmark thought for evaluating Neural Radiance Fields (NeRFs) and, in general, Neural Rendering (NR) frameworks. We design and implement an effective pipeline for scanning real objects in quantity and effortlessly. Our scan station is built with less than 500$ hardware budget and can collect roughly 4000 images of a scanned object in just 5 minutes. Such a platform is used to build ScanNeRF, a dataset characterized by several train/val/test splits aimed at benchmarking the performance of modern NeRF methods under different conditions. Accordingly, we evaluate three cutting-edge NeRF variants on it to highlight their strengths and weaknesses. The dataset is available on our project page, together with an online benchmark to foster the development of better and better NeRFs.
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The Concept Bottleneck Models (CBMs) of Koh et al. [2020] provide a means to ensure that a neural network based classifier bases its predictions solely on human understandable concepts. The concept labels, or rationales as we refer to them, are learned by the concept labeling component of the CBM. Another component learns to predict the target classification label from these predicted concept labels. Unfortunately, these models are heavily reliant on human provided concept labels for each datapoint. To enable CBMs to behave robustly when these labels are not readily available, we show how to equip them with the ability to abstain from predicting concepts when the concept labeling component is uncertain. In other words, our model learns to provide rationales for its predictions, but only whenever it is sure the rationale is correct.
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